OmnibusFisher: A Modified Fisher’s Method to Test Overall Gene-Level Effect

The separate p-values of SNPs, RNA expressions and DNA methylations are calculated by KM regression. The correlation between different omics data are taken into account. This method can be applied to either samples with all three types of omics data or samples with two types.

Version: 1.0
Depends: CompQuadForm, stringr
Imports: survey
Published: 2018-12-19
Author: Qi Yan
Maintainer: Qi Yan <qiy17 at pitt.edu>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: OmnibusFisher results

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Reference manual: OmnibusFisher.pdf
Package source: OmnibusFisher_1.0.tar.gz
Windows binaries: r-devel: OmnibusFisher_1.0.zip, r-devel-gcc8: OmnibusFisher_1.0.zip, r-release: OmnibusFisher_1.0.zip, r-oldrel: OmnibusFisher_1.0.zip
OS X binaries: r-release: OmnibusFisher_1.0.tgz, r-oldrel: OmnibusFisher_1.0.tgz

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