ribd: Pedigree-based Relatedness Coefficients

Recursive algorithms for computing various relatedness coefficients, including pairwise kinship, kappa and identity coefficients. Both autosomal and X-linked coefficients are computed. Founders are allowed to be inbred. In addition to the standard pairwise coefficients, ribd also computes a range of lesser-known coefficients, including generalised kinship coefficients (Karigl (1981) <doi:10.1111/j.1469-1809.1981.tb00341.x>; Weeks and Lange (1988) <https:www.ncbi.nlm.nih.gov/pmc/articles/PMC1715269>), two-locus coefficients (Thompson (1988) <doi:10.1093/imammb/5.4.261>) and multi-person coefficients. This package is part of the ped suite, a collection of packages for pedigree analysis with 'pedtools' as the core package for creating and handling pedigree objects.

Version: 1.0.0
Depends: R (≥ 3.5.0), pedtools
Imports: slam, kinship2, glue
Suggests: identity, testthat
Published: 2019-11-01
Author: Magnus Dehli Vigeland ORCID iD [aut, cre]
Maintainer: Magnus Dehli Vigeland <m.d.vigeland at medisin.uio.no>
License: GPL-3
URL: https://github.com/magnusdv/ribd
NeedsCompilation: no
Language: en-GB
Materials: README NEWS
CRAN checks: ribd results

Downloads:

Reference manual: ribd.pdf
Package source: ribd_1.0.0.tar.gz
Windows binaries: r-devel: ribd_1.0.0.zip, r-devel-gcc8: ribd_1.0.0.zip, r-release: ribd_1.0.0.zip, r-oldrel: ribd_1.0.0.zip
OS X binaries: r-release: ribd_1.0.0.tgz, r-oldrel: ribd_1.0.0.tgz

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